Login
Logged in as anonymous /
My BiBiServ
/
Logout
Search
?
Navigation
Tools
Alignment
AltAVist
ClustalW
dca
Dialign
E2G
JAli
OMA
PoSSuMsearch
PoSSuMsearch2
SWIFT Suit
Evolutionary Relationships
ConCysFind
Roci
ROCOCO
Rose
SplitsTree
Genome Comparison
AGenDA
AggloIndel
CEGeD
CG-CAT
DCJ
FFGC
Gecko
GEvolutionS
GraphTeams
MGA
newdist
REPuter
SBBI
TCRProfiler
Others
acdc
AGT-SDP
AIM
BPR
Decomp
Fly_Pres
Intronserter
jPREdictor
libfid
Metrans
mkESA
mmfind
MoRAine
Phase4
PREdictor
SciBrow
TALP
Trace2PS
Unwords
Wotd
XenDB
Primer Design
genefisher2
RNA
Shapes Studio
KnotInFrame
pAliKiss
pKiss
pknotsRG
RapidShapes
RNAalishapes
RNAshapes
aCMs
GUUGle
InSilicoDicer
Locomotif
paRNAss
planACstar
RNAforester
RNAhybrid
RNAsifter
Previous Results
Framework/Cloud
Education
Dynamic Programming
ADP
Sequence Analysis
SADR
Administration
BiBiServ policies
BiBiServ Team
Impressum
license
privacy policy
Statuscodes
RNAshapes
Welcome
Submission
WebService
Download
Manual
FAQ
References
Reset Session
Janssen, Stefan and Giegerich, Robert
The RNA shapes studio
, Bioinformatics, 2015
Giegerich, Robert and Voss, Bjoern and Rehmsmeier, Marc
Abstract Shapes of RNA
, Nucleic Acids Research, 2004
Lorenz, Ronny and Bernhart, Stephan H and Hoener zu Siederdissen, Christian and Tafer, Hakim and Flamm, Christoph and Stadler, Peter F and Hofacker, Ivo L
ViennaRNA Package 2.0
, Algorithms Molecular Biology, 2011
Gruber, Andreas R and Lorenz, Ronny and Bernhart, Stephan H and Neuboeck, Richard and Hofacker, Ivo L
The Vienna RNA Websuite
, Nucleic Acids Research, 2008
Mathews, David H. and Disney, Matthew D. and Childs, Jessica L. and Schroeder, Susan J. and Zuker, Michael and Turner, Douglas H.
Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure
, Proceedings of the National Academy of Sciences of the United States of America, 2004
Turner, Douglas H. and Mathews, David H.
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
, Nucleic Acids Research, 2010
Janssen, Stefan and Schudoma, Christian and Steger, Gerhard and Giegerich, Robert
Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction
, BMC Bioinformatics, 2011
Janssen, Stefan and Giegerich, Robert
Faster computation of exact RNA shape probabilities
, Bioinformatics, 2010
Voss, Bjoern and Giegerich, Robert and Rehmsmeier, Marc
Complete probabilistic analysis of RNA shapes
, BMC Biology, 2006
Reeder, Jens and Giegerich, Robert
Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction
, Bioinformatics, 2005
Steffen, Peter and Voss, Bjoern and Rehmsmeier, Marc and Reeder, Jens and Giegerich, Robert
RNAshapes: an integrated RNA analysis package based on abstract shapes
, Bioinformatics, 2006
McCaskill and S., John
The Equilibrium Partition Function and Base Pair Binding Probabilities for RNA Secondary Structure.
, Biopolymers, 1990
Weeks and M., Kevin
Advances in RNA Secondary and Tertiary Structure Analysis by Chemical Probing.
, Current Opinion in Structural Biology, 2010
Deigan, Katherine E. and Li, Tian W. and Mathews, David H. and Weeks, Kevin M.
Accurate SHAPE-directed RNA structure determination.
, Proceedings of the National Academy of Sciences, 2009
Saule, Cedric and Giegerich, Robert
Pareto optimization in algebraic dynamic programming.
, Algorithms for Molecular Biology, 2015
RNAshapes
BiBiServ policies
WebService Linklist
FAQ
RITC
BiBiServ Team
TALP
KnotInFrame
RNAalishapes
license
PoSSuMsearch
Decomp
acdc
Locomotif
RapidShapes
WebService
Reset Session
GraphTeams
RNAforester
Previous Results
jPREdictor
XenDB
ClustalW
newdist
RNAshapes
GUUGle
libfid
SWIFT Suit
Reset Session
References
aCMs
ConCysFind
OMA
SciBrow
References
planACstar
ROCOCO
E2G
genefisher2
Trace2PS
DCJ
pknotsRG
RNAshapes
MoRAine
TCRProfiler
Submission
BPR
Rose
Impressum
AGenDA
pAliKiss
AggloIndel
RITC
SBBI
Dialign
Fly_Pres
paRNAss
Download
SplitsTree
Wotd
CEGeD
REPuter
PoSSuMsearch2
ADP
JAli
mkESA
MGA
Manual
RNAhybrid
mmfind
FAQ
CG-CAT
FFGC
SADR
privacy policy
Intronserter
InSilicoDicer
AltAVist
Submission
GEvolutionS
AIM
Gecko
Statuscodes
References
Metrans
PREdictor
dca
Download
Unwords
Roci
Bellman's GAP Cafe
AGT-SDP
pKiss
Phase4
WebService
Manual
RNAsifter