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Janssen, Stefan and Giegerich, Robert The RNA shapes studio, Bioinformatics, 2015 |
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Theis, Corinna and Janssen, Stefan and Giegerich, Robert Prediction of RNA secondary structure including kissing hairpin motifs, WABI10, Springer-Verlag, 2010 |
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Janssen, Stefan and Giegerich, Robert Faster computation of exact RNA shape probabilities, Bioinformatics, 2010 |
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Janssen, Stefan and Schudoma, Christian and Steger, Gerhard and Giegerich, Robert Lost in folding space? Comparing four variants of the thermodynamic model for RNA secondary structure prediction, BMC Bioinformatics, 2011 |
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Mathews, David H. and Disney, Matthew D. and Childs, Jessica L. and Schroeder, Susan J. and Zuker, Michael and Turner, Douglas H. Incorporating chemical modification constraints into a dynamic programming algorithm for prediction of RNA secondary structure, Proceedings of the National Academy of Sciences of the United States of America, 2004 |
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Theis, Corinna and Reeder, Jens and Giegerich, Robert KnotInFrame: prediction of -1 ribosomal frameshift events, Nucleic Acids Res., 2008 |
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Turner, Douglas H. and Mathews, David H. NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure, Nucleic Acids Research, 2010 |
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Voss, Bjoern and Giegerich, Robert and Rehmsmeier, Marc Complete probabilistic analysis of RNA shapes, BMC Biology, 2006 |
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Reeder, Jens and Giegerich, Robert Consensus shapes: an alternative to the Sankoff algorithm for RNA consensus structure prediction, Bioinformatics, 2005 |
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