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Locomotif - First Steps

Start the Locomotif (webstart) application to construct and generate a matcher !

Construct a finished structure (with only the open 5' and 3' ends) : Use the left buttons to choose a building block. Place the first building block on the canvas by a mouse click. Add subsequent ones to available open ends or use them to start new structure parts. Single strands can only be used in closed structures with only one open end left per structure part. Then, they can be used to prolong the 5' or 3' end or to connect either of these with different structure parts. Use the top buttons for editing operations on the motif.

Matcher generation: Using the menu "Translation->Send XML", send the XML code to our server for translation on the server. You will obtain a bibiserv ID once compilation is finished. This may take some time!

Running the matcher: You can run the generated matcher program directly via Locomotif using the menu "Run Matcher->Sequence".

A first introduction to the use of the Locomotif editor is If you have further questions or wish a more detailed introduction, please refer to the Locomotif manual.