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Secondary Structure Prediction Structure Comparison
Illustration Shape Variation Exercise Multiple Sequence Exercise RNAforester
Bielefeld University Center of Biotechnoloy Institute of Bioinformatics BiBiServ
 
RNA Secondary Structure Comparison - Exercise 2
  1. Predict the structures of the human transferrin receptor 3'UTR (gi|37432|emb|X01060.1) and the ferritin heavy chain 5'UTR (gi|461189|dbj|D28463.1) with RNAfold.
  2. Compute a local structure alignment with RNAforester.
  3. Find out if this motif is already annotated in the UTR Database and what the purpose of this motif is.