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The Program

mga assumes that the sequences to be aligned have been indexed by the program . The commandline has the following syntax:

$\begin{Showprogramwithoptions} % latex2html id marker 51 {\texttt{mga}\xspace }{... ...{}{ Show a summary of all options and terminate. } \end{Showprogramwithoptions}$

Each of the options may be specified only once.

Jan Krueger 2012-12-14